Standard Formats

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FieldML v0.5


FieldML Version 0.5

Synopsis

Declarative language for representing hierarchical models using generalized mathematical fields.

Description

The FieldML project has made significant progress towards the goal of addressing the need to have open standards and open source software for representing finite element method (FEM) models and, more generally, multivariate field models, such as many of the models that are core to the euHeart project and the Physiome project. FieldML version 0.5 is the most recently released format from the FieldML project. It is an XML format that already has sufficient capability to represent the majority of euHeart's explicit models such as the anatomical FEM models and simulation solution fields. The details of FieldML version 0.5 are presented, as well as its limitations and some discussion of the progress being made to address these limitations.*

*(Britten RD et al. Medical & Biological Engineering & Computing. 2013;51(11):1191-1207. )

Publication Date

07/2013

Authors

Hunter, Peter
D. Britten, Randall
G. Christie, Richard
Littl, Caton
K. Miller, Andrew
Bradley, Chris
Wu, Alan
Yu, Tommy
Nielsen, Poul

Organizations


Biological Scales

Scale molecular cellular tissue organ organism ecosystem
Support potential intrinsic intrinsic intrinsic potential unknown

Spatial Representation

Spatial Representation Level Compartment Dimensions Gradients Spatial Structures
Support intrinsic intrinsic intrinsic intrinsic

Modeling Formalisms for this format

Software support for this format

Examples for this format


Advantage

  • Model components reusability

Modularity: yes


Components Relation
Flat Network: no


Supported Math

MathML Support: no

Full MathML Support: no

Description

Expressions for higher level mathematical concepts including differential and integrational calculus.


Unit Support

Unit Required: no

Support: no support

Description

Unit support is planned for future versions.

Annotation Support


There are no transformations available!

FieldML-API


Programming language

C++

Links

no validators available

FieldML


Description

Declarative language for representing hierarchical models using generalized mathematical fields.

Publication date

07/2013

Organizations

Links

Webpage

All formats for this class

no license information