Standard Formats

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SBOL Visual v1.0.0


Synthetic Biology Open Language Visual Version 1.0.0

Synopsis

Graphical notation to support the description and specification of genetic designs.

Description

The Synthetic Biology Open Language Visual (SBOL Visual) project is an effort to create an open-source graphical notation to support the description and specification of genetic designs. SBOL Visual is intended for use by biological engineers in forward engineering projects. It aims to encourage and support model-driven engineering by establishing a common set of symbols.*

*(Specification (SBOL Visual) - Jacqueline Quinn,  et al.:  http://sbolstandard.org/downloads/specification-sbol-visual/ (date: 01.10.2015))

Publication Date

03/2013

Authors

Quinn, Jacqueline
Beal, Jacob
Clancy, Kevin
Pocock, Matthew
Bhatia, Swapnil
Cai, Patrick
Chen, Joanna
Hillson, Nathan
Galdzicki, Michal
Maheshwari, Akshay
P, Umesh
Rodriguez, Cesar
Stan, Guy-Bart
Endy, Drew

Organizations


Biological Scales

Scale molecular cellular tissue organ organism ecosystem
Support intrinsic unknown unknown unknown unknown unknown

Spatial Representation

Spatial Representation Level Compartment Dimensions Gradients Spatial Structures
Support unknown unknown unknown unknown

Modeling Formalisms for this format

Software support for this format

Examples for this format


Advantage

  • Standardized graphical layout of a model

Modularity: no


Components Relation
Flat Network: no


Supported Math


Unit Support

Unit Required: no

Support: no support


Annotation Support


There are no transformations available!
no validators available

Synthetic Biology Open Language (SBOL)


Description

SBOL is a language to describe synthetic biology constructs.


Publication date

03/2012

Organizations

Links

Webpage

All formats for this class

Custom License


Description

Copyright © The BioBricks Foundation (2013). All Rights Reserved.

Owner

The BioBricks Foundation

Links